e36146e3005f23eaec0223fcfe699837 *DESCRIPTION
0f1e0fff3036f85f2f6f5d5d1663191a *NAMESPACE
302518dfaa141ef7f5b1673a451b786c *R/data.R
eb461164ea6a3bf025cb75749e9904ed *R/lib_kl.R
e7efb676ed02a1fa6f8bc3b0a87b94e2 *R/lib_kr.R
5e7e7fbb07806a62f8a85ac61d016e58 *R/lib_mixkl.R
acd7b095b3468c37f4ad05ff018c67ec *R/lib_mixkr.R
8fc0ce871e6ad58369a22a66cefc1a96 *R/prob_emission.R
121616df0bddbf6b32c894cfe1bedfe3 *R/read_zdata.R
a92017dec9ff53544e5945f3700fce82 *R/zooplot_segments.R
4abc48839e91488c00e3cbaff8b769cf *R/zooroh.R
9d7acd9e3d5010210600f2b49c36766c *R/zooroh_accessor.R
8fb38284226433a5b0793b2646b2fc42 *R/zooroh_model.R
c2b671a5f60c578a50887e04a5ae954a *R/zplot_individual.R
7832ddbaba59c987dc2beb4838a32b52 *R/zplot_prophbd.R
9741df12ca0cdc9d0f601e19a5f0c047 *R/zplot_vertical.R
978697cc28c5c67556cd7677f0335607 *build/vignette.rds
d4da291bc18ea28292daf78aea66b39d *data/BBB_NMP_GP_subset.RData
a558e5b3d0fd40d0a3a58cf469da5ef4 *data/BBB_NMP_ad_subset.RData
3120d1696f9d568980628a6613017614 *data/BBB_NMP_pl_subset.RData
572c1dce386660f1bac783cb23f97e19 *data/BBB_PE_gt_subset.RData
65dc644ae028f73581b8bec8183a3d43 *data/BBB_samples.RData
ab830e019a0241fb3e60b4c91b9c5c1b *data/genoex.RData
e93167884ca009be5f480853737601a9 *data/genosim.RData
4b767f2a9b4543a6299a459c575fefa1 *data/rara_mix10r.RData
eb12ccb73703035459070522cdb78e5e *data/soay_mix10r.RData
e630101b3e0d7bce671e3b2c02ca347f *data/typs.RData
204566d4f41c08f08caee17a3ae1c252 *data/typsfrq.RData
f2711d537d799bd1d6f698620dfa31d7 *data/wilt_mix10r.RData
964a7f6c913bb45ef458c349cf2301fd *inst/CITATION
cc31b6de1cf6fa790424ff1ef401fba4 *inst/doc/zooroh-vignette.R
eead49e85fbaa0fb69ab4a5dc63201f5 *inst/doc/zooroh-vignette.Rmd
bdec2ea42494e183f799d4953f049a3a *inst/doc/zooroh-vignette.pdf
ccf009f88ff00893e8e96bf8c00bdb95 *inst/exdata/BBB_NMP_GP_subset.txt
f7195865d31b2aa3ba16ae5c4eb42512 *inst/exdata/BBB_NMP_ad_subset.txt
66278d9dd795a9cccbd587b63399e145 *inst/exdata/BBB_NMP_pl_subset.txt
f7195865d31b2aa3ba16ae5c4eb42512 *inst/exdata/BBB_NMP_subset.txt
0d0520f44a42528f100ccfeb8d96aa29 *inst/exdata/BBB_PE_gt_subset.txt
06b48d5426a08c546912b2c545efaeae *inst/exdata/BBB_samples.txt
71eabd71fe1530e4a977459c1aca09c7 *inst/exdata/genoex.txt
a2d3e27f68fff30a4551f433fcba6e6e *inst/exdata/genosim.txt
3df4e09e7b68b5bb6af181e6f9971c8c *inst/exdata/typs.txt
769d7033220f3dd9304ebdba176b9230 *inst/exdata/typsfrq.txt
b8fb89a7d0734f7ca96eac0936e627f5 *man/BBB_NMP_GP_subset.Rd
63d280996615bdd0b500a3fb84c48475 *man/BBB_NMP_ad_subset.Rd
47e7ceeacf217668bb9ae8451b4a290e *man/BBB_NMP_pl_subset.Rd
3f43dfb9158e38174857b829027af898 *man/BBB_PE_gt_subset.Rd
2b14aba00aca9ba92587d1de13a252eb *man/BBB_samples.Rd
0bcf66414a00a666e7e9d6018e6b604e *man/RZooRoH-package.Rd
e5c0de1e3444c63eccaf35f803e54e4e *man/cumhbd.Rd
ee34844ecff230cc193f45eafc885e53 *man/genoex.Rd
e794096f525335b67523386d7a71830d *man/genosim.Rd
7acec0103b772fde14cf1a85f8b82363 *man/probhbd.Rd
26f730e5794af657dcf17e7b0f663904 *man/rara_mix10r.Rd
e6314be1af9b342ab2ee2dfe2332758f *man/realized.Rd
920b2ded17ebebd6041ffa50cd7349cc *man/rohbd.Rd
86e6a711bd331539345d2ba08d6f2765 *man/soay_mix10r.Rd
000031cdf0e83f431e70a0ce42277dde *man/typs.Rd
87323473b7d7394e68eb20250488d801 *man/typsfrq.Rd
0056fed4d93ed38418daaac217d5201c *man/wilt_mix10r.Rd
53c5858bed7146c6b56a15c6efcb8b49 *man/zoodata.Rd
c0839e51b0a1c65fe09300ce5fb2daa6 *man/zoodoris.Rd
f20cf4e9069f51c3f36baf98219fca40 *man/zoomodel.Rd
790b42d4222da958bf16e37d432f38aa *man/zooplot_hbdseg.Rd
6e9eabe7d1246cccbf65e1afe0212e76 *man/zooplot_individuals.Rd
07f4910fe4f1cc3748806a0ac054d18b *man/zooplot_partitioning.Rd
b48c961e03c1ec827b140bc72db1e642 *man/zooplot_prophbd.Rd
0a29bf741e3cb4a87a11015d864102a2 *man/zoorun.Rd
0f0027263f9740db7d13f54b7eba550a *man/zoosimd.Rd
a5c231ccb60f296026e4b9dcfc2bb33c *src/RZooRoH_init.c
816a565f9f65f9d66079f5d642280710 *src/random_number_wrapper.c
a3e0d20467676152e10587d427689a9f *src/zooEM.f90
ec73d16f36d932d085f1e6d8ebc5b1b9 *src/zooFB.f90
228ea0322f0b133ed9ae4c6622b93af3 *src/zooSIM.f90
e7a7406db9b3530ab39f6d414ee48f53 *src/zooViterbi.f90
d0a83eb060105710130f7967915f9ab1 *src/zoolayerEM.f90
67a86e6256fb17a1d6d9b1a43477eb17 *src/zoolayerFB.f90
418eb517114e0d2a67203948f3b510e7 *src/zoolayerViterbi.f90
10dba64812f8d7ec512cdbb518fee44d *src/zoolayerlik.f90
327facc22a8cd4005d8c650a30163cce *src/zoolik.f90
f85cef421d1b6ec23f1fbec47b6da94d *tests/testthat.R
04028a05e35ed5ea441d72a1c03ffce1 *tests/testthat/test1.R
3826b80689bc0a8e49c3373a28449276 *tests/testthat/test2.R
a4ecb925465606ccd29a04acc8583b3a *vignettes/BBB_hdbseg_densities.pdf
fb0694195e0028174593abd0082d3738 *vignettes/Effect_density_error_lowfoldII.pdf
fe4426d9d3a076635d24adec1b00cb83 *vignettes/Fig4hb_barplot_filteredRR.pdf
c62142aa5777b16e16db048b52a228a9 *vignettes/Figure1.pdf
396e46384cc2424cf4fd1e722d860214 *vignettes/Figure2.pdf
59123240a52c74bf180f354c080a38f0 *vignettes/biomed-central.csl
2ee8a5e250b5e4a1693aa412cfe57bd5 *vignettes/genetics.csl
c567a0986a8194e42b6096f8f01f40eb *vignettes/rzoo.bib
eead49e85fbaa0fb69ab4a5dc63201f5 *vignettes/zooroh-vignette.Rmd
