5389a98bb2068cfc4cb16d9006835712 *DESCRIPTION
b253e48982f0d611b1cb0e008403e6e7 *LICENSE
90127f1c791920d5dd4f7108f06e9d6c *NAMESPACE
61fa8384e8a41479dc4ff3d336ac6b2e *NEWS.md
bef0f9c69b2230abcc0a22d055556185 *R/BD_ordinations.R
a6852173dcc866325a4c0dd46ccea40c *R/BD_shift.R
6afd8408e39280fee7bb9a147fc1931b *R/DESeq2_l2fc.R
b261d1f0afd308c0a2c8676d8eb30f2f *R/HRSIP.R
e111a8d3f8bc24555bfa35106284437f *R/HTSSIP.R
083a1a860b5a03ebed174f6b738ea338 *R/HTSSIP_sim.R
442cfc3d34e0395ab3abe18970aa79f6 *R/Util.R
cb97b8ba4ce428ea0196282e35517c51 *R/chk.R
756ed769ac936736c77cbd8dc34df88a *R/delta_BD.R
133999d1da6881beaa31e1de0a06ec89 *R/phyloseq_subset.R
09b1161c8a717806c4d46a744db62ae6 *R/pkg_data.R
9a360189d2bb14f89e71a2582ef89b30 *R/qPCR.R
8773a2d53362c3beeeb7c6838c97b61b *R/qSIP_atom_excess.R
cd36d16cf6c576025365a54c91d367e0 *R/qSIP_trans.R
3e189ffc1e55768ff421db6487a73414 *R/stringterpolate.R
7c21c0a6a990876ce204a730553ccb23 *README.md
27972d7610f76639544f27c6b29d8b4d *build/vignette.rds
08be372a73667144d623403341cc5da5 *data/datalist
da6b33ea48561d0fb041f7d05939d484 *data/physeq_S2D1.rda
4400e6225bdf0f29962eaf60a72d5b34 *data/physeq_S2D1_l.rda
3a8b3aefd30f7e6ffdb4a068c0802555 *data/physeq_S2D2.rda
a4c14c1da00db30c3d0da7462d95eb62 *data/physeq_S2D2_l.rda
ea7e9662f7a7191b119769bcf85164f3 *data/physeq_rep3.rda
325bbe77f7c3841c56d79778b382f1c4 *data/physeq_rep3_qPCR.rda
1911cf66304347f08efc64cc0ae0dc02 *inst/CITATION
cc286a3323e5940abbdbe775e8326564 *inst/doc/BD_shifts.R
6eb2d0043b2d1a6450e9d41227ca4c0e *inst/doc/BD_shifts.Rmd
60e5897e03f88a3c02a12cabe5937d88 *inst/doc/BD_shifts.html
9390a728e1f579fb225a523fa20f2e05 *inst/doc/HTSSIP_intro.R
4bd584d58d64e913b451e85cdebd2341 *inst/doc/HTSSIP_intro.Rmd
b2344d4925f83165e000ef7c2e7f213f *inst/doc/HTSSIP_intro.html
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942f8226d2b35c042525cb3a7a094a4b *inst/doc/HTSSIP_sim.Rmd
69c000976e9be9d1ca9098c9891bb798 *inst/doc/HTSSIP_sim.html
3623571ca95019c82b2533ed2fc97c9e *inst/doc/MW_HR_SIP.R
84658044da433cb453a6cab082a35e47 *inst/doc/MW_HR_SIP.Rmd
0e9708bad8faff069500001d846f5f4f *inst/doc/MW_HR_SIP.html
1e9397c530f32db09142a36e92343c97 *inst/doc/beta_diversity_ordinations.R
5a81d10de05237c41897c6acbff0b01f *inst/doc/beta_diversity_ordinations.Rmd
aca7c2e120d2f784f4c3cd11627eb2d2 *inst/doc/beta_diversity_ordinations.html
e7a4849517ba0fb4abe157cfac94e4b1 *inst/doc/qSIP.R
6dfa554b3efdf87bd6669ee23625283d *inst/doc/qSIP.Rmd
a839944bde1af669067cfd9a7203b3c3 *inst/doc/qSIP.html
bcd0e78e5b7bee3be5796367689ee788 *inst/doc/quant_incorp.R
574a1f94fd1be0259474c6c89a885261 *inst/doc/quant_incorp.Rmd
ab2c43418e064d15280003dacf15be02 *inst/doc/quant_incorp.html
48ff0064f60023b28de5ad3a5168b867 *man/BD_shift.Rd
bcc7cbf2894de54f117b56662e29b1bd *man/DESeq2_l2fc.Rd
389c0674954543429b61e3d26d9bd29c *man/HRSIP.Rd
ea466102ba1459c66ff3661b372e9efc *man/HTSSIP.Rd
076ebd77fc5d1a0f5a9813012b7f2dc4 *man/HTSSIP_sim.Rd
0e9d3dc2bb623da36a3b2b3a8f4c1bb8 *man/OTU_qPCR_trans.Rd
5cb67c7d99615678eec0b7a1433d1528 *man/SIP_betaDiv_ord.Rd
d90238db504e93578586ad754b09b47a *man/as.Num.Rd
8999e3a33eea7e0c6b7a173a2e1a9d19 *man/calc_Gi.Rd
fee3feb0ff62caca7e0d56998e8a6c41 *man/calc_Mheavymax.Rd
5d8c1a69b6158cf38cbd193652a80252 *man/calc_atom_excess.Rd
7369c1c8c226f62fab431eb7a4119b32 *man/data-physeq_S2D1.Rd
41d650ffe597b740c3949448ce2617f8 *man/data-physeq_S2D1_l.Rd
67e63b282349c59ec86baf23a042b69c *man/data-physeq_S2D2.Rd
05137df2869ec40326e9649f0d6e7d5e *man/data-physeq_S2D2_l.Rd
b9367d7b837b622d99d6ee8380321091 *man/data-physeq_rep3.Rd
9df42faf69be9fe11af98d60afee9da2 *man/data-physeq_rep3_qPCR.Rd
ccf5625442df3bd88a3ca0f1e55d902e *man/delta_BD.Rd
832a1f9e061bb7d31409d3e0d2777d0c *man/evaluate_matches.Rd
63320a088813a66added881df988c31b *man/expr_param_extract.Rd
7b029d4df325472de480b2020e56eb41 *man/extract_expressions.Rd
f27617ce492b256f34d565ae5601388f *man/extract_formats.Rd
b8fabaf35ef15cb1b15c6356f0731bcf *man/filter_l2fc.Rd
dfff59488692582657b2d38ad150274e *man/format_metadata.Rd
72cdb19ff7ffcc2fd5572600c060b7f3 *man/fraction_overlap.Rd
3188fcdca9f04843364442b7d6ab3fdc *man/get_treatment_params.Rd
864002030c3f1286072037b54017818d *man/gradient_sim.Rd
d99beb8a0628b15a953f01693706119d *man/match_brace.Rd
aa26c4ef6ea51ee15e54f20ab4d96aca *man/match_placeholders.Rd
f74443249d525f4f4f1a51090ac266f6 *man/max_BD_range.Rd
3ad84b578ebc3067b404a25c1dcfe2f2 *man/overlap_wmean_dist.Rd
4d39a1daef3e422164d6c8b08811602e *man/parse_dist.Rd
45d2eba6942259416d22eb690eea2c79 *man/perc_overlap.Rd
9cb7812b9a923583ea39f75990eb7750 *man/phyloseq2df.Rd
93a60df187350dacc622a8aee3eeea14 *man/phyloseq2table.Rd
5d195589b2084713f6380200f8ad317b *man/phyloseq_list_ord_dfs.Rd
68710eff6b535f4e655a9220e158a719 *man/phyloseq_ord_plot.Rd
589c1713409d5317daf337804666abc1 *man/phyloseq_subset.Rd
e096fcc560f3a519e243df811ed44c39 *man/physeq_format.Rd
e2e6799d1d8c719baa8b1eb7bc3a6951 *man/physeq_list_betaDiv.Rd
79bfca543f6fb31361c9b0790c9557e9 *man/physeq_list_ord.Rd
a356ac05f1ce3a01bf7ad1db6cffd3a9 *man/qPCR_sim.Rd
05ad3582a1e84f96c438061fc264add3 *man/qSIP_atom_excess.Rd
1d83fdfe7e2a79e2354254f4910c2728 *man/qSIP_atom_excess_format.Rd
08e7c86602c2be6152c166f39114e2cf *man/qSIP_bootstrap.Rd
4eb1432748e15ae976f59c16a5798de7 *man/stringterpolate.Rd
d4e3d1e8c7ef516042b00e697d4b04bb *man/tss.Rd
8584b4292dbc04a4366b011c25383634 *tests/testthat.R
19d4dce0c271fe0b0cda6b3c86ae403e *tests/testthat/test-BD_ordinations.R
b126d6c333bfc8a8cb89a6b6393e716b *tests/testthat/test-BD_shift.R
1f62e9f34a4be76c18678d769604aa7c *tests/testthat/test-DESeq2_l2fc.R
1dc23beb373f99fd59b1ed4be4937f26 *tests/testthat/test-HRSIP.R
e12c7b3befb638650731184e8f457f9a *tests/testthat/test-HTSSIP_sim.R
80c0b86e519dc6d6b179d58f5d623fa1 *tests/testthat/test-Util.R
06dd5cd07fc45a8b4cb460d18d2d8a78 *tests/testthat/test-chk.R
d5160c67641f4976279fe9e53cd8a3a8 *tests/testthat/test-delta_BD.R
f46cac3e0746370646374f093900ef4c *tests/testthat/test-phyloseq_subset.R
f8db14565a15d0d07d7bfbedb9b16f34 *tests/testthat/test-qPCR.R
ebcf337838dfc2f93208170d8d5d8753 *tests/testthat/test-qSIP_atom_excess.R
e98ec715b4046a9664233a6a62247afd *tests/testthat/test-qSIP_trans.R
77f25b4efb81123d84d5dcaeecc86992 *tests/testthat/test-stringterpolate.R
6eb2d0043b2d1a6450e9d41227ca4c0e *vignettes/BD_shifts.Rmd
4bd584d58d64e913b451e85cdebd2341 *vignettes/HTSSIP_intro.Rmd
942f8226d2b35c042525cb3a7a094a4b *vignettes/HTSSIP_sim.Rmd
84658044da433cb453a6cab082a35e47 *vignettes/MW_HR_SIP.Rmd
5a81d10de05237c41897c6acbff0b01f *vignettes/beta_diversity_ordinations.Rmd
6dfa554b3efdf87bd6669ee23625283d *vignettes/qSIP.Rmd
574a1f94fd1be0259474c6c89a885261 *vignettes/quant_incorp.Rmd
