84cd502bc199c03730d1a2212846fdf8 *DESCRIPTION
d9f7f9c2e88703d70898bc71ad7e5a6f *NAMESPACE
8a0e06a1ded145396a8585bdb145b9d5 *R/RcppExports.R
a5a3aace01462450372dd5c14848c4a9 *R/ancestry_module.R
945687b1d78ee482d146b164138c13b3 *R/calculate_allele_frequencies.R
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9deb94c9f884cabf5104314d85ec94f1 *R/calculate_heterozygosity.R
919c4b437e34d407e014103ee520474a *R/calculate_ld.R
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2db4c02abcafb1b0204ae3e0165d4245 *R/create_input_data.R
cb881f00ab79520107a693cdf4a9e06c *R/create_iso_female.R
713601994f25cf3b5006f72f78eb3f4d *R/create_iso_female_data.R
7ac579ba688ea5114031d0eb3e0c9985 *R/data.R
c2d17d222664207dae55941303a545a6 *R/joyplot_frequencies.R
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1fc041b85ddc7ed066140b39b06ab4e3 *R/migration_settings.R
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61d6b2ac0eb9702772b69aa6b661bdd0 *R/plot_over_time.R
5d77736c7af2141afd659f3ab21a6b97 *R/plot_start_end.R
7572eacc03cd4c737e1beea25f416224 *R/save_load.R
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2e8460462960aa4c1854829c17ea1f47 *R/simulate_admixture.R
a9114a3de927ef13dca5718bb22a90dd *R/simulate_ancestry.R
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4d1777c556be8cb2865051a3c442dab2 *R/simulate_sequence.R
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afc53bead53a5bf6aa509c1fd2d7b430 *R/simulate_sequence_until.R
7252559f32ba4e60d98e9cd94ded9cdf *R/utilities.R
c254f935502a4aa2a65bd037e6ccca83 *README.md
cf5f9a284913a326c3b4fc30748590fe *build/vignette.rds
eb58c0531f57b4bbb4e5cf3c958b8896 *data/dgrp2.3R.5k.data.rda
212dfb80c125ff102eca3914e818b298 *inst/doc/Demonstrate_isofemales.R
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1b5acaffabd26ad3b8bab60e9c430dfe *man/calculate_fst.Rd
7ecf7289ef0eb3fa63ea6de3b16b91ec *man/calculate_heterozygosity.Rd
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bd9799b5f3756bb383e4a7771c0bd56a *man/calculate_marker_frequency.Rd
1ca714d518264bce35202067e17c4aa3 *man/combine_input_data.Rd
3a72296c58d45c5f243c5499318410b1 *man/create_artificial_genomeadmixr_data.Rd
61e337bbfff2ec1ffb4c884d7db87a97 *man/create_iso_female.Rd
df040b2e23a972b4829d0abdf0c195ad *man/dgrp2.3R.5k.data.Rd
0cfc39a2703de3f188d5c35227d7edf6 *man/iso_female_ancestry.Rd
4731af25681f2657226561b31eab1190 *man/iso_female_sequence.Rd
288cfeea93632b1317b501634f299752 *man/load_population.Rd
ddef741c23a4802c03b637b251c41492 *man/migration_settings.Rd
7d30f3e4989796982aac550aff399ad9 *man/plink_to_genomeadmixr_data.Rd
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cc6e24af687708d16649df07bb697ded *man/plot_joyplot_frequencies.Rd
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d1a61fb6f6dadedc57c0f42f96a06321 *man/save_population.Rd
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60d1ddaa204ad84176490bd33aa22406 *man/simulate_admixture.Rd
72267e4ce4398f943328fc470d39e0e0 *man/simulate_ancestry.Rd
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9d38a71e73d0055f01489727ac4808e3 *man/vcfR_to_genomeadmixr_data.Rd
6ae1bc9f057aac2a1c1ff264a63cc06b *man/write_as_plink.Rd
df7ead60462a45d977d071bbbb6e8ecb *src/Fish.cpp
155df9e31761d1b5fd05c431d094c92c *src/Fish.h
d4f20c5f075219aa7f1da5c8707422dd *src/Fish_emp.h
d13eed17fb7662af5a6c1b13b043e03f *src/Makevars
c956da317864d95f28851a642f9df740 *src/Makevars.win
4f20675436ba938ece17d14e8e087a7f *src/RcppExports.cpp
4af2433242ef13d935d4f5ba3110832a *src/helper_functions.cpp
ef294af748968aa0e2aec39346c1a7bf *src/helper_functions.h
abf9313bdaa4416ae332a04be9330c56 *src/random_functions.h
a46bbf2649827c937a3613c09c3e95db *src/simulate.cpp
a9708090933375abdafb0648e0bc90fd *src/simulate_emp.cpp
c13874f6ba3b634bd0976ff9f650fe5f *src/simulate_migration.cpp
eca5d59c6116dd110ff63de11a114e06 *src/simulate_migration_emp.cpp
120850808feec7e5fe0598b14ecc083f *tests/testthat.R
fcff8fcd46f13c9b86393afb4e161a1d *tests/testthat/Rplots.pdf
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627c727655ffb010c0e7bff0a52f6451 *tests/testthat/test-combined_input_data.R
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6fba0fdcbd807291f973ed81963a4c87 *tests/testthat/test-junctions.R
3459d27d0b7c12d45e7aade84e18fbc9 *tests/testthat/test-plink.R
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14913d9382a803401fa8217fddf1a72a *tests/testthat/test-simulate_migration.R
72a108bc88782d2a2d1d98bf298ecdd0 *tests/testthat/test-utilities.R
f5715360a7672bf002436ec1fc65ab76 *vignettes/Demonstrate_isofemales.Rmd
609ee2c49acbfe9a2d82e8206f000491 *vignettes/Empirical_data.Rmd
d69c802701a121b5cde3c23f5df4663c *vignettes/Joyplots.Rmd
d5d9506b768eb6652aa1f7fa3ed7792d *vignettes/Visualization.Rmd
f3e1d55d351fc392bc0fdcbaec0cf6e6 *vignettes/Walkthrough.Rmd
