b16404d9de28549444d5f734afa660af *DESCRIPTION
a5c90a25bb627e58e61d388be3b16494 *NAMESPACE
984193cb042de1c03bfe8bc5b1068d2c *R/BALCONYfunctions.R
dca37e76eb5117355d736afb1e45e9e4 *README.md
3e22b65408db10d4c0f4b29fdb247a63 *data/alignment.RData
27b999107cbf5deadc025f99b37bf993 *data/gonnet.RData
28bce39c0b56b43fecc7e4eda8ffe7f5 *data/small_alignment.RData
41d84722bd551f33064bc65a5dab5698 *data/structure.RData
a12c64fa47759d7f2970f6c0ab10d59a *inst/extdata/4jnc.pdb
b87d088fff83867b4c6f0dcc810dcd59 *inst/extdata/GONNET.txt
1239886e59b3fc4aaa7b847ad901e9f6 *inst/extdata/T1_4JNC.structure
d6560e11c4be6855f63b01724f1c3826 *inst/extdata/T2_4JNC.structure
cab53fc783da05613ef0935284d3f269 *inst/extdata/T3_4JNC.structure
2b709dd141b93b910c1c001d3ce6f31d *inst/extdata/aln2_312_pro.fasta
4194b4e83f110275cf2c826806a0921f *man/CRE_conservativity.Rd
87dd9f060620b864b9ea6b57f7388302 *man/D_matrix.Rd
6f9bc32bd413e0d8886e8380d15e74a8 *man/Escore_conservativity.Rd
c5936a277de81f27c17e310abc3ebbbc *man/RealValET_conservativity.Rd
376f22537e34852aaac8136069923598 *man/align_params.Rd
24ff7d4e165db3c563f31475fe24c5f0 *man/align_seq_mtx2grs.Rd
980ceee8502b8ced0b2a88a31bc6d17f *man/alignment.Rd
80bc34f21df303ed69c72d125b603d0d *man/alignment2matrix.Rd
4e9c37a68bc6dcecbffc80bcdfa66cd4 *man/barplotshow.Rd
1c540cc8b07aaa5c6c7540e8b2770cc7 *man/calculate_AA_variation.Rd
7508e0523b52eb7bcedd84aca6ad6af3 *man/calculate_pseudo_counts.Rd
b6939f6a749a6895415ccd4064b813bb *man/compare_cons_metrics.Rd
171d54ac8718cc34da7f59db6774f317 *man/cons2seqs_ident.Rd
5687fe4f25c6d317b895671ca2734187 *man/cons2seqs_sim.Rd
47776e57350ea1699c6290c5c2eaf9d0 *man/consensus.Rd
2d570385ccecb65c8e28b0e489d4481a *man/convert_AA_symbol.Rd
ef759f332a20fadba2f625de5523c7aa *man/create_final_csv.Rd
83a0733d6b3372e26561f07094e0cd1f *man/create_structure_seq.Rd
f8e41476cbc423cc718dfcc994a3809f *man/delete_isoforms.Rd
1d89f3a77d042d03398f649cd72092a2 *man/excl_low_prob_strcts.Rd
5b09b7426645baf144874f0ead52343c *man/find_consecutive_seq.Rd
b4616bc7ce792d67d9d3cdf6bde0d93f *man/find_seq.Rd
5046edec7779cac3a2787299440d8dfc *man/find_seqid.Rd
83960a205bf2ea09985c8ec5932f288e *man/get_pos_based_seq_weights.Rd
249af84fbf53c80e4ab8dccf7302468f *man/get_prot_entropy.Rd
18b7ef1ce51f8ac9d7998710b0bd3d8a *man/get_remarks465_pdb.Rd
4fc0c4a0f5c09454ee2e48445d73834d *man/get_seq_names.Rd
9d7eaf7f6a301fa3ebc5fed948bde6b1 *man/get_seq_weights.Rd
e8f5e0db82e9fd76560746b327505c3b *man/get_structures_entropy.Rd
11e9d7179d83163fb54d221be9d97cc2 *man/get_structures_idx.Rd
9a5d290ff3954bb283e7c6a6340e2c8d *man/gonnet.Rd
04018d0400f1f589fa04f786ea784e90 *man/is_upper.Rd
3e527aa2ff8603e60edc5cee56dfc794 *man/kabat_conservativity.Rd
93e78daf6323032df8b110bd9610c7ee *man/kolmogorov_smirnov_test.Rd
f3b909f9099818206f0d509decdb1f67 *man/landgraf_conservativity.Rd
40f3d514862a94cc1248ca1b80d1d25b *man/noteworthy_seqs.Rd
8c9fbbd4ab3fb4d111fa329a03d93b05 *man/pairwise_alignment_MSA.Rd
98026ff1468f8b21aed9268e55750bdc *man/plot_entropy.Rd
f94127323c223c5ce073dd8375c9d6e1 *man/plot_structure_on_protein.Rd
718d0fb9e427e1851fd98b02f00ef800 *man/prepare_structure_profile.Rd
b3d89be0e39688338302a68e1cd04ed1 *man/preprocess_hmm_output.Rd
fa06f991fd86244072ddb36d904eee4c *man/read_structure.Rd
e2cc19a5ed3191785961dc0b7bb7b866 *man/schneider_conservativity.Rd
cedc6f3e13e5ce33643637832224fda4 *man/shannon_conservativity.Rd
6d70e517920d8b17001de5ec491d7afb *man/small_alignment.Rd
0efed190e8f6f9e0ec9dae0d3991cd58 *man/structure.Rd
6b8e3bf982e8bade55eabf5ac2ff0967 *man/substitution_mtx.Rd
